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1

Rectified Proton Grotthuss Conduction Across a Long Water-Wire in the Test Nano-Tube of the Polytheonamide B Channel

Matsuki, Yuka, Iwamoto, Masayuki, Mita, Kenichiro, Shigemi, Kenji, Matsunaga, Shigeki, Oiki, Shigetoshi

Journal:

Journal of the American Chemical Society

Year:

2016

Language:

english

File:

PDF, 2.41 MB

english, 2016

2

Constitutive boost of a K + channel via inherent bilayer tension and a unique tension-dependent modality

Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.04 MB

english, 2018

3

Structure and dynamics of solvent molecules inside the polytheonamide B channel in different environments: a molecular dynamics study

Kalathingal, Mahroof, Sumikama, Takashi, Mori, Toshifumi, Oiki, Shigetoshi, Saito, Shinji

Journal:

Physical Chemistry Chemical Physics

Year:

2018

Language:

english

File:

PDF, 5.71 MB

english, 2018

4

Gating-Associated Clustering–Dispersion Dynamics of the KcsA Potassium Channel in a Lipid Membrane

Sumino, Ayumi, Yamamoto, Daisuke, Iwamoto, Masayuki, Dewa, Takehisa, Oiki, Shigetoshi

Journal:

The Journal of Physical Chemistry Letters

Year:

2014

Language:

english

File:

PDF, 4.65 MB

english, 2014

5

Two types of HKT transporters with different properties of Na+ and K+ transport in Oryza sativa

Tomoaki Horie, Kazuya Yoshida, Hideki Nakayama, Katsuyuki Yamada, Shigetoshi Oiki, Atsuhiko Shinmyo

Journal:

The Plant Journal

Year:

2001

Language:

english

File:

PDF, 314 KB

english, 2001

6

2SP5-05 Single-molecular measurements for structural and functional fluctuations of KcsA potassium channel.(2SP5 How are biological molecules fluctuating?,The 47th Annual Meeting of the Biophysical Society of Japan)

Oiki, Shigetoshi, Shimizu, Hirofumi, Iwamoto, Masayuki, Konno, Takashi

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 230 KB

english, 2009

7

10.2142/biophys.55.069

OIKI, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2015

File:

PDF, 102 KB

2015

8

3A1124 Oriented reconstitution of a potassium channel KcsA in a giant unilamellar vesicle(3A Biol & Artifi memb 3: Excitation & Channels,The 49th Annual Meeting of the Biophysical Society of Japan)

Yanagisawa, Miho, Iwamoto, Masayuki, Kato, Ayako, Yoshikawa, Kenichi, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2011

Language:

english

File:

PDF, 224 KB

english, 2011

9

Lipid Bilayer Experiments with Contact Bubble Bilayers for Patch-Clampers

Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Journal of Visualized Experiments

Year:

2019

File:

PDF, 1.10 MB

2019

10

Supplement: Ionic Currents in Development || Electric Currents Associated with Directed Migration of Fibroblasts

Shigetoshi Oiki, Takako Ohno-Shosaku and Yasunobu Okada

Journal:

Biological Bulletin

Year:

1989

Language:

english

File:

PDF, 579 KB

english, 1989

11

Probing “ambivalent” snug-fit sites in the KcsA potassium channel using three-dimensional reference interaction site model (3D-RISM) theory

Phongphanphanee, Saree, Yoshida, Norio, Oiki, Shigetoshi, Hirata, Fumio

Journal:

Pure & Applied Chemistry

Year:

2014

Language:

english

File:

PDF, 1.71 MB

english, 2014

12

3PT164 Identification of the interaction site with the effective phospholipids for the KcsA potassium channel activity(The 50th Annual Meeting of the Biophysical Society of Japan)

Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

13

3A1136 Role of Central Cavity in Ion Permeation through K^+ Channel(3A Biol & Artifi memb 3: Excitation & Channels,The 49th Annual Meeting of the Biophysical Society of Japan)

Sumikawa, Takashi, Saito, Shinji, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2011

Language:

english

File:

PDF, 454 KB

english, 2011

14

A Cytotoxic Peptide from a Marine Sponge, Polytheonamide B; II. Properties for Ion Conduction and Voltage Dependent Gating

Iwamoto, Masayuki, Shimizu, Hirofumi, Muramatsu, Ikunobu, Matsunaga, Shigeki, Oiki, Shigetoshi

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 41 KB

english, 2010

15

3PT165 Selective Ion Permeation though the Kv1.2 Channel(The 50th Annual Meeting of the Biophysical Society of Japan)

Sumikama, Takashi, Saito, Shinji, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 214 KB

english, 2012

16

The Asymmetric Lipid Bilayer Revealed Sidedness of the Effective Phospholipids on the Single-Channel Properties of the KcsA Potassium Channel

Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 42 KB

english, 2012

17

Structural changes of the KcsA potassium channel upon application of the electrode potential studied by surface-enhanced IR absorption spectroscopy

Yamakata, Akira, Shimizu, Hirofumi, Osawa, Masatoshi, Oiki, Shigetoshi

Journal:

Chemical Physics

Year:

2013

Language:

english

File:

PDF, 955 KB

english, 2013

18

Entrance of Channel Determines Ion Permeation Rate through the Kv1.2 Channel

SUMIKAMA, Takashi, OIKI, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2018

File:

PDF, 1.40 MB

2018

19

Anionic Contribution for Fibrous Maturation of Protofibrillar Assemblies of the Human Tau Repeat Domain in a Fluoroalcohol Solution †

Konno, Takashi, Oiki, Shigetoshi, Hasegawa, Kazuhiro, Naiki, Hironobu

Journal:

Year:

2004

Language:

english

File:

PDF, 378 KB

english, 2004

20

2SH-01 Analysis of Single Molecular Gating Dynamics of the KcsA Potassium Channels Responding to Rapid Changes of Solutior Conditions(2SH Star of life shined by frontier microscopies,Symposium,The 50th Annual Meeting of the Biophysical Society of Japan)

Shimizu, Hirofumi, Iwamoto, Masayuki, Royant, Antoine, Davic von, Stetten, Guerin, Laurent, Aoki, Yoshimitsu, Wulff, Michael, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

21

2SH-07 Tracking the Motions of Single Potassium Channels by Time resolved X-ray Diffraction(2SH New Experimental Tools for Structural Changes of Membrane Proteins: Beyond X-ray Structures,The 49th Annual Meeting of the Biophysical Society of Japan)

Shimizu, Hirofumi, Iwamoto, Masayuki, Konno, Takashi, Royant, Antoine, Steffen, David von, Guerin, Laurent, Wulff, Michael, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2011

Language:

english

File:

PDF, 226 KB

english, 2011

22

2SCA-01 Gating-related clustering-dispersion dynamics of the KcsA potassium channel on the membrane(2SCA Single Ion Channels updated : From elementary processes to disease treatments,Symposium,The 51th Annual Meeting of the Biophysical Society of Japan)

Sumino, Ayumi, Yamamoto, Daisuke, Sumikama, Takashi, Iwamoto, Masayuki, Dewa, Takehisa, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2013

Language:

english

File:

PDF, 693 KB

english, 2013

23

Microscopic Mechanism of Ion Permeation through K+ Channel

Sumikama, Takashi, Ohmine, Iwao, Oiki, Shigetoshi

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 35 KB

english, 2010

24

Dependency of Ion Permeation Pattern on K+ Concentration through the Kv1.2 Channel

Sumikama, Takashi, Saito, Shinji, Oiki, Shigetoshi

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 39 KB

english, 2013

25

Oriented Reconstitution of a Membrane Protein in a Giant Unilamellar Vesicle: Experimental Verification with the Potassium Channel KcsA

Yanagisawa, Miho, Iwamoto, Masayuki, Kato, Ayako, Yoshikawa, Kenichi, Oiki, Shigetoshi

Journal:

Journal of the American Chemical Society

Year:

2011

Language:

english

File:

PDF, 3.65 MB

english, 2011

26

Covalent Blocking of Fibril Formation and Aggregation of Intracellular Amyloidgenic Proteins by Transglutaminase-Catalyzed Intramolecular Cross-Linking †

Konno, Takashi, Morii, Takashi, Hirata, Akiyoshi, Sato, Shin-ichi, Oiki, Shigetoshi, Ikura, Koji

Journal:

Year:

2005

Language:

english

File:

PDF, 392 KB

english, 2005

27

3P021 The Enhancement of Structural Fluctuations Prior to The Opening Conformational Changes of The KcsA Potassium Channel(01B. Protein: Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Shimizu, Hirofumi, Iwamoto, Masayuki, Oota, Yumiko, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2014

Language:

english

File:

PDF, 729 KB

english, 2014

28

3P-209 Temperature-dependence of Proton Permeation through a Voltage-Gated Proton Channel(The 46th Annual Meeting of the Biophysical Society of Japan)

Kuno, Miyuki, Ando, Hiroyuki, Morihata, Hirokazu, Sakai, Hiromu, Mori, Hiroyuki, Shimizu, Hirofumi, Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2008

Language:

english

File:

PDF, 562 KB

english, 2008

29

Lipid Bilayers Manipulated through Monolayer Technologies for Studies of Channel-Membrane Interplay

Oiki, Shigetoshi, Iwamoto, Masayuki

Journal:

Biological & Pharmaceutical Bulletin

Year:

2018

Language:

english

File:

PDF, 3.95 MB

english, 2018

30

1P-193 pH-dependent gating of KcsA potassium channel examined by using an "inactivation-free" mutant, E71A(Biol & Artifi memb.:Excitation & Channels, The 47th Annual Meeting of the Biophysical Society of Japan)

Matsuki, Yuka, Iwamoto, Masayuki, Shimizu, Hirofumi, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 439 KB

english, 2009

31

Queueing arrival and release mechanism for K+ permeation through a potassium channel

Sumikama, Takashi, Oiki, Shigetoshi

Journal:

The Journal of Physiological Sciences

Year:

2019

Language:

english

File:

PDF, 3.86 MB

english, 2019

32

Structure and Dynamics of Membrane-embedded KcsA Potassium Channel Revealed by Atomic Force Microscopy

SUMINO, Ayumi, YAMAMOTO, Daisuke, SUMIKAMA, Takashi, IWAMOTO, Masayuki, DEWA, Takehisa, OIKI, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2015

File:

PDF, 1.79 MB

2015

33

1P221 Gating-associated clustering-dispersion dynamics of the KcsA potassium channel in a lipid membrane environment(13C. Biological & Artificial membrane: Excitation & Channels,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Sumino, Ayumi, Yamamoto, Daisuke, Iwamoto, Masayuki, Dewa, Takehisa, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2014

Language:

english

File:

PDF, 694 KB

english, 2014

34

Two-sided action of protons on an inward rectifier K+channel (IRK1)

Sabirov, R. Z., Okada, Yasunobu, Oiki, Shigetoshi

Journal:

Pflügers Archiv European Journal of Physiology

Year:

1997

Language:

english

File:

PDF, 271 KB

english, 1997

35

A Cytotoxic Peptide from a Marine Sponge, Polytheonamide B: I. Channel Activity and Vectorial-Insertion Into the Membrane

Iwamoto, Masayuki, Shimizu, Hirofumi, Muramatsu, Ikunobu, Matsunaga, Shigeki, Oiki, Shigetoshi

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 44 KB

english, 2010

36

Laser-Triggered Single Molecular Gating Motions of the KcsA Potassium Channels Recorded in a Sub-Millisecond Time Resolution

Shimizu, Hirofumi, Iwamoto, Masayuki, Konno, Takashi, Royant, Antoine, Von David, Stetten, Laurent, Guerin, Wulff, Michael, Oiki, Shigetoshi

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 37 KB

english, 2012

37

Channel Protein Engineering: Synthetic 22-Mer Peptide from the Primary Structure of the Voltage-Sensitive Sodium Channel Forms Ionic Channels in Lipid Bilayers

Shigetoshi Oiki, Waleed Danho and Mauricio Montal

Journal:

Proceedings of the National Academy of Sciences

Year:

1988

Language:

english

File:

PDF, 951 KB

english, 1988

38

M2 δ , a Candidate for the Structure Lining the Ionic Channel of the Nicotinic Cholinergic Receptor

Shigetoshi Oiki, Waleed Danho, Vincent Madison and Mauricio Montal

Journal:

Proceedings of the National Academy of Sciences

Year:

1988

Language:

english

File:

PDF, 920 KB

english, 1988

39

pH-dependent promotion of phospholipid flip-flop by the KcsA potassium channel

Nakao, Hiroyuki, Ikeda, Keisuke, Iwamoto, Masayuki, Shimizu, Hirofumi, Oiki, Shigetoshi, Ishihama, Yasushi, Nakano, Minoru

Journal:

Biochimica et Biophysica Acta (BBA) - Biomembranes

Year:

2015

Language:

english

File:

PDF, 1.03 MB

english, 2015

40

Oriented Reconstitution of the Full-Length KcsA Potassium Channel in a Lipid Bilayer for AFM Imaging

Sumino, Ayumi, Uchihashi, Takayuki, Oiki, Shigetoshi

Journal:

The Journal of Physical Chemistry Letters

Year:

2017

Language:

english

File:

PDF, 2.76 MB

english, 2017

41

1P368 Changes in surface exposing sites of the KcsA potassium channel upon active gating : Effect of a channel blocker, tetrabutylammonium (TBA)(14. Ion channels and receptors,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)

Iwamoto, Masayuki, Shimizu, Hirofumi, Inoue, Fumiko, Konno, Takashi, Sasaki, Yuji C., Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2006

Language:

english

File:

PDF, 163 KB

english, 2006

42

2P221 Rolling of N-terminal amphipathic helix on the anionic inner membrane leaflet stabilizes the open state of the KcsA potassium channel(13C. Biological & Artifical membrane: Excitation & Channels,Poster)

Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2013

Language:

english

File:

PDF, 693 KB

english, 2013

43

3P223 Rectified proton permeation through the hydrogen-bonded water-chain in a channel peptide(Biological & Artificial membrane: Excitation & Channels,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Yuka, Matsuki, Masayuki, Iwamoto, Shigeki, Matsunaga, Shigetoshi, Oiki

Journal:

Seibutsu Butsuri

Year:

2014

Language:

english

File:

PDF, 695 KB

english, 2014

44

Evidence for the involvement of calmodulin in the operation of Ca-activated K channels in mouse fibroblasts

Yasunobu Okada, Toshihiho Yada, Takako Ohno-Shosaku, Shigetoshi Oiki

Journal:

Journal of Membrane Biology

Year:

1987

Language:

english

File:

PDF, 708 KB

english, 1987

45

1P-194 Conformational Changes of Single-Molecular KcsA Potassium Channels during Gating Recorded in a Sub-Millisecond Time Resolution(Biol & Artifi memb.:Excitation & Channels, The 47th Annual Meeting of the Biophysical Society of Japan)

Shimizu, Hirofumi, Iwamoto, Masayuki, Konno, Takashi, Sakakura, Reo, Aoki, Yoshimitsu, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2009

Language:

english

File:

PDF, 222 KB

english, 2009

46

3P030 The Refinement of the Diffracted X-ray Tracking Method for Recording the Single-Molecule Motions of Proteins with Higher Time Resolution(01A. Protein: Structure,Poster)

Shimizu, Hirofumi, Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2013

Language:

english

File:

PDF, 730 KB

english, 2013

47

2G1558 Direct Observation of Ion Entryway of Potassium Channel KcsA in Lipid Bilayer by Atomic Force Microscopy(Biological & Artificial Membranes,Oral Presentation,The 50th Annual Meeting of the Biophysical Society of Japan)

Sumino, Ayumi, Sumikama, Takashi, Iwamoto, Masayuki, Dewa, Takahisa, Oiki, Shigetoshi

Journal:

Seibutsu Butsuri

Year:

2012

Language:

english

File:

PDF, 208 KB

english, 2012

48

The Sensing Sites for the Membrane Inner Lipids Regulate the Activation Gating of the KcsA Potassium Channel

Iwamoto, Masayuki, Oiki, Shigetoshi

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 40 KB

english, 2013

49

ATR-FTIR Spectroscopy Revealing the Different Vibrational Modes of the Selectivity Filter Interacting with K + and Na + in the Open and Collapsed Conformations of the KcsA Potassium Channel

Furutani, Yuji, Shimizu, Hirofumi, Asai, Yusuke, Fukuda, Tetsuya, Oiki, Shigetoshi, Kandori, Hideki

Journal:

The Journal of Physical Chemistry Letters

Year:

2012

Language:

english

File:

PDF, 1.49 MB

english, 2012

50

Channel function reconstitution and re-animation: a single-channel strategy in the postcrystal age

Oiki, Shigetoshi

Journal:

The Journal of Physiology

Year:

2015

Language:

english

File:

PDF, 1.39 MB

english, 2015

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